Ancient population · Medieval

CA LSCI (Medieval)

Name: CA LSCI (Medieval) (CA_LSCI)
Creator: Genoplot

CA_LSCI

CA LSCI (Medieval) is an ancient population in Genoplot's G25 reference catalogue (CA_LSCI), with 3 samples from United States, dated to c. 940–1530 CE.

Among ancient populations it sits closest to San Catalina Island (Medieval), CA Late San Nicolas (Medieval) and San Nicolas L (Medieval); the nearest living populations are Huichol, Pima and Mixe.

Its men carry Y-DNA haplogroup Q1b; its mtDNA haplogroups include B2a, C1b and Cb16.

Period: Medieval
Date: c. 940–1530 CE
Country: United States
Sampled near: California 33.43, -118.88
Sites: California
San Catalina Island
San Clemente Island
Samples: 3
Published in: ScheibKivisildScience2018
Catalogue: CA_LSCI.SG variant

Nearest populations

Distance between population averages in scaled G25 space, ×100. Lower is closer. It says who resembles this population, not who descends from it; an nMonte model tests that.

Ancient
#	Population	Distance
1	San Catalina Island (Medieval)`San_Catalina_Island`	0.70
2	CA Late San Nicolas (Medieval)`CA_Late_SanNicolas`	1.59
3	San Nicolas L (Medieval)`San_Nicolas_L`	1.79
4	CA San Cruz Island Chumash (Medieval)`CA_SanCruz_IslandChumash`	1.88
5	San Nicolas E (Bronze Age)`San_Nicolas_E`	1.88
6	Island Chumash San Cruz (Medieval)`Island_Chumash_SanCruz`	1.95
7	Nevada Lovelock Cave (Medieval, c. 600 BP)`Nevada_LovelockCave_600BP`	2.05
8	CA Early San Nicolas (Bronze Age)`CA_Early_SanNicolas`	2.06
9	Yamana (Medieval, c. 1000 BP)`Yamana_1000BP`	2.14
10	Nevada Spirit Cave (Hunter-Gatherer, c. 11000 BP)`Nevada_SpiritCave_11000BP`	2.19

Modern
#	Population	Distance
1	Huichol`Huichol`	2.16
2	Pima`Pima`	2.26
3	Mixe`Mixe`	2.38
4	Nahua`Nahua`	2.58
5	Zapotec`Zapotec`	2.69
6	Mayan`Mayan`	2.72
7	Mixtec`Mixtec`	2.97
8	Cachi`Cachi`	3.35
9	Bolivian La Paz`Bolivian_LaPaz`	3.64
10	Colla`Colla`	3.76

Haplogroups

Y-DNA

1 man with a call

Q1b1a1a Q-M848

mtDNA

3 individuals with a call

Individuals 6

The samples behind this population in the catalogue. Outliers are kept out of the population's average. Sex, date, site and haplogroups are from the Allen Ancient DNA Resource; Y-DNA calls are mostly automatic, from the shown terminal SNP.

Sample	Sex	Date	Site	Y-DNA	mtDNA
`CT-01_noUDG.SG`	M	1440-1634 calCE	California	Q1b1a1a Q-M848	C1b41a1a
`SC-04_noUDG.SG`	F	1039-1255 calCE	San Catalina Island		B2a5
`SC-05_noUDG.SG`	F	775-1025 calCE	San Clemente Island		Cb16a1
`SC-01_noUDG.SG` outlier	F	700-1300 CE	San Catalina Island		Cb16a1
`SC-06_noUDG.SG` outlier	M	700-1300 CE	San Catalina Island	Q1b1a1a Q-BZ4256	C1b41a
`SC-07_noUDG.SG` outlier	F	700-1300 CE	San Catalina Island		C1b41a1a